Information for 6-TACTTGGC (Motif 6)


Reverse Opposite:

p-value:1e-35
log p-value:-8.282e+01
Information Content per bp:1.610
Number of Target Sequences with motif535.0
Percentage of Target Sequences with motif17.83%
Number of Background Sequences with motif187.1
Percentage of Background Sequences with motif6.92%
Average Position of motif in Targets37.5 +/- 19.2bp
Average Position of motif in Background36.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RIM101/MA0368.1/Jaspar

Match Rank:1
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:TACTTGGC-
--CTTGGCG

RIM101/Literature(Harbison)/Yeast

Match Rank:2
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:TACTTGGC-
--CTTGGCA

RIM101(MacIsaac)/Yeast

Match Rank:3
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:TACTTGGC-
--CTTGGCA

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:TACTTGGC---
--NTTGGCANN

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.84
Offset:3
Orientation:forward strand
Alignment:TACTTGGC-
---TTGGCA

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TACTTGGC---
-NNTTGGCANN

HAP2/MA0313.1/Jaspar

Match Rank:7
Score:0.81
Offset:3
Orientation:forward strand
Alignment:TACTTGGC
---TTGGT

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:TACTTGGC--
--CTTGGCAA

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TACTTGGC--
NNACTTGCCTT

bZIP68/MA0968.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TACTTGGC
CCACGTGGC