Information for 14-CGGCGRCC (Motif 10)


Reverse Opposite:

p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.685
Number of Target Sequences with motif129.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif39.4
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets36.2 +/- 20.9bp
Average Position of motif in Background46.0 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF094/MA1049.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CGGCGRCC
CGGCGGCG

ERF112/MA1002.1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGRCC
TGGCGGCGGN-

abi4/MA0123.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGGCGRCC--
CGGTGCCCCC

ERF11/MA1001.1/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGRCC
NTGNCGGCGN--

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGRCC
GCGGCGACA

ERF8/MA0994.1/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGRCC
NNTGGCGGCG---

ERF069/MA0997.1/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGRCC
NGGCGGCGN--

ERF008/MA0979.1/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGRCC
GGGCGGCG---

ERF7/MA0993.1/Jaspar

Match Rank:9
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGRCC
NNTGGCGGCG---

ERF13/MA1004.1/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGGCGRCC
TGGCGGCG