Information for 17-CAATGACTGT (Motif 11)


Reverse Opposite:

p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.838
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.6 +/- 20.7bp
Average Position of motif in Background26.7 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ATHB-7/MA0954.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAATGACTGT
NAATGATTGN

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAATGACTGT
-CATGAC---

ATHB-12/MA0950.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAATGACTGT
-AATGATTG-

ATHB5(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAATGACTGT
GGTCCAATTATTG-

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAATGACTGT------
CAATCACTGGCAGAAT

HAT1/MA1024.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAATGACTGT
NAATGATTGN

ATHB-5/MA0110.2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAATGACTGT
GGTCCAATTATTG-

ASH1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAATGACTGT
--CTGACT--

ATHB1(HD-ZIP)/Arabidopsis thaliana/AthaMap

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAATGACTGT
CAATAATTG-

pho/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAATGACTGT
-AATGGC---