Information for 16-CTTAACCA (Motif 12)


Reverse Opposite:

p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.911
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets31.8 +/- 20.1bp
Average Position of motif in Background43.4 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GT-1/MA1020.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CTTAACCA
GTTAACCA

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTTAACCA--
GTTAACTAGN

Lbe/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTTAACCA-
NGTTAACTAG

lbe/MA0231.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CTTAACCA
--TAACTA

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTTAACCA------
GANGTTAACTAGTTTNN

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CTTAACCA----
ACTTAGTTAACTAAAAA

WRKY63/MA1092.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTAACCA
GTTGACCN

bap/MA0211.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTTAACCA
CACTTAA---

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTTAACCA-----
AGCTGTTAACTAGCCGT

grh/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTTAACCA-
---AACCAG