Information for 17-GACGCGAG (Motif 15)


Reverse Opposite:

p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.468
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets39.0 +/- 17.7bp
Average Position of motif in Background43.0 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI6(MacIsaac)/Yeast

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GACGCGAG
GACGCG--

MBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GACGCGAG
GACGCGT-

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GACGCGAG
GACGCGT-

STB1/STB1_YPD/1-SWI4,1-SWI6(Harbison)/Yeast

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GACGCGAG-
AAACGCGAAA

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GACGCGAG
AACGCGT-

MBP1/MA0329.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GACGCGAG
-ACGCGTA

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GACGCGAG-
GACGCGAAA

ARG80(MacIsaac)/Yeast

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GACGCGAG
AGACGC---

FHL1/MA0295.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GACGCGAG
GACGCAAA

ARG80/MA0271.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GACGCGAG
AGACGC---