Information for 21-TATGAATAGA (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.829
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets37.7 +/- 22.7bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TATGAATAGA
TCTAAAAATAGA

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TATGAATAGA
ACTATAAATAGA

RLM1/MA0369.1/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TATGAATAGA---
NNATCTATTTATAGAANN

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TATGAATAGA
GCTATAAATAGC

vvl/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TATGAATAGA
--TGAATA--

RLM1(MacIsaac)/Yeast

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TATGAATAGA
TATTTATAGA

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TATGAATAGA-
-ATGMATATDC

unc-86/MA0926.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TATGAATAGA
ATATGCAT---

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TATGAATAGA--
AATATTAATAAAGA

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TATGAATAGA
NNTNTCATGAATGT-