Information for 5-VGGAAGTG (Motif 4)


Reverse Opposite:

p-value:1e-48
log p-value:-1.114e+02
Information Content per bp:1.724
Number of Target Sequences with motif548.0
Percentage of Target Sequences with motif18.27%
Number of Background Sequences with motif158.0
Percentage of Background Sequences with motif5.80%
Average Position of motif in Targets36.8 +/- 19.6bp
Average Position of motif in Background37.7 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ETV6/MA0645.1/Jaspar

Match Rank:1
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--VGGAAGTG
AGCGGAAGTG

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--VGGAAGTG
ACAGGAAGTG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----VGGAAGTG-
TTAAGAGGAAGTTA

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:4
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---VGGAAGTG-
NDCAGGAARTNN

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--VGGAAGTG
DCCGGAARYN

ELF5/MA0136.2/Jaspar

Match Rank:6
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---VGGAAGTG
ACCCGGAAGTA

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--VGGAAGTG
AGAGGAAGTG

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---VGGAAGTG
AVCAGGAAGT-

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--VGGAAGTG
RCCGGAAGTD

Gabpa/MA0062.2/Jaspar

Match Rank:10
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-VGGAAGTG--
CCGGAAGTGGC