Information for 12-GTCATATC (Motif 6)


Reverse Opposite:

p-value:1e-22
log p-value:-5.183e+01
Information Content per bp:1.805
Number of Target Sequences with motif180.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif34.7
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets40.2 +/- 20.8bp
Average Position of motif in Background37.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GTCATATC
GTCATN--

RTG3(MacIsaac)/Yeast

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GTCATATC
TGAGTCAT---

Atf3/MA0605.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GTCATATC
ACGTCATC--

HVH21(HD-KNOTTED)/Hordeum vulgare/AthaMap

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GTCATATC
ANCTGTCACNNN

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTCATATC
NCTGTCANNT-

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTCATATC
GCTGTCAAAN-

TOS8/MA0408.1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GTCATATC
CTGTCAAA--

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTCATATC
NTGTCAN---

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTCATATC
NCTGTCANAG-

WRKY40/MA1085.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTCATATC
TGGTCAAC--