Information for 13-CTAAATWAGG (Motif 7)


Reverse Opposite:

p-value:1e-13
log p-value:-3.176e+01
Information Content per bp:1.781
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets38.6 +/- 16.1bp
Average Position of motif in Background43.4 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Al/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTAAATWAGG
NGCTAATTAA--

MF0008.1_MADS_class/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTAAATWAGG
CCATATATGG

SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTAAATWAGG
CCAAAAAGGG

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTAAATWAGG---
NNCTNAATTATGANN

SEP3/MA0563.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTAAATWAGG-
CCAAAAATGGA

CG11294/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTAAATWAGG
CTAATTAATN

SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTAAATWAGG--
CCAWAWWTGGWA

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTAAATWAGG--
TTCCATATATGGAA

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTAAATWAGG
TNCCATATATGG

tll/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTAAATWAGG
--AAATTAA-