Information for 1-TAAAATAG (Motif 1)


Reverse Opposite:

p-value:1e-36
log p-value:-8.518e+01
Information Content per bp:1.621
Number of Target Sequences with motif242.0
Percentage of Target Sequences with motif28.64%
Number of Background Sequences with motif35.9
Percentage of Background Sequences with motif5.06%
Average Position of motif in Targets37.6 +/- 20.9bp
Average Position of motif in Background36.4 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--TAAAATAG
CCAAAAATAG

br(var.2)/MA0011.1/Jaspar

Match Rank:2
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:TAAAATAG--
--AAATAGTA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---TAAAATAG-
DCYAAAAATAGM

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---TAAAATAG-
KCCAAAAATAGC

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----TAAAATAG--
ATGCTAAAAATAGAA

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---TAAAATAG-
GCTAAAAATAGC

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TAAAATAG
-TAAATAG

br-Z2/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TAAAATAG----
--AAATAGAAAA

bin/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TAAAATAG
ATAAATA-

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TAAAATAG-
TCTAAAAATAGA