Information for 12-CGAGCCGC (Motif 10)


Reverse Opposite:

p-value:1e-11
log p-value:-2.718e+01
Information Content per bp:1.605
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.27%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets37.0 +/- 20.8bp
Average Position of motif in Background26.2 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STP1(MacIsaac)/Yeast

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:CGAGCCGC-
-GCGCCGCA

STP1/MA0394.1/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CGAGCCGC-
-GCGCCGCA

RAP2-3/MA1051.1/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CGAGCCGC-
-GCGCCGCC

ERF094/MA1049.1/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:CGAGCCGC--
--CGCCGCCG

ERF1B/MA0567.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CGAGCCGC--
--CGCCGCCA

ERF069/MA0997.1/Jaspar

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CGAGCCGC--
-GCGCCGCCA

CRF4/MA0976.1/Jaspar

Match Rank:7
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CGAGCCGC-
-GCGCCGCC

CRF2/MA0975.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGAGCCGC-
-CCGCCGCC

ERF7/MA0993.1/Jaspar

Match Rank:9
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CGAGCCGC----
--CGCCGCCATT

ERF109/MA1053.1/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGAGCCGC-
-GCGCCGCC