Information for 15-GSCGGTTA (Motif 12)


Reverse Opposite:

p-value:1e-8
log p-value:-2.037e+01
Information Content per bp:1.805
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.33%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets38.2 +/- 22.4bp
Average Position of motif in Background15.8 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GSCGGTTA
TCGGCGGCTA

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GSCGGTTA
GGCVGTTR

UME6(MacIsaac)/Yeast

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GSCGGTTA
TCGGCGGCTA

Gam1/MA0034.1/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GSCGGTTA--
GGCGGTTGTC

UME6/MA0412.1/Jaspar

Match Rank:5
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GSCGGTTA---
TCGGCGGCTAATT

GAMYB(MYB)/Hordeum vulgare/AthaMap

Match Rank:6
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GSCGGTTA
GGCGGTTG

AtMYB77(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:7
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GSCGGTTA-
AAGTGACAGTTAC

F3A4.140/MA0575.1/Jaspar

Match Rank:8
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GSCGGTTA-
AAGTGACAGTTAC

ERF1B/MA0567.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GSCGGTTA
TGGCGGCG-

YDR026c/YDR026c_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GSCGGTTA--
GCCGGGTAAA