Information for 17-TGCGTAGA (Motif 15)


Reverse Opposite:

p-value:1e-4
log p-value:-9.459e+00
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets34.3 +/- 19.8bp
Average Position of motif in Background42.6 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NAC083/MA1043.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGCGTAGA
NGTTGCGTAT-

vvl/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCGTAGA
TGCATA--

vvl/MA0254.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCGTAGA
TGCATA--

FHL1/MA0295.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCGTAGA
TTTGCGTC--

PDR8/MA0354.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCGTAGA-
-ACGGAGAT

NAC025/MA0935.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGCGTAGA
GTTACGTA--

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCGTAGA-
-GAGTATAA

CHA4(MacIsaac)/Yeast

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCGTAGA-
TGCGATGAG

NAC080/MA0939.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTAGA
TTGCGTGT-

Gmeb1/MA0615.1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TGCGTAGA---
NNNTNGTACGTAANNNN