Information for 2-AAGTCABT (Motif 2)


Reverse Opposite:

p-value:1e-34
log p-value:-7.857e+01
Information Content per bp:1.629
Number of Target Sequences with motif251.0
Percentage of Target Sequences with motif29.70%
Number of Background Sequences with motif44.1
Percentage of Background Sequences with motif6.22%
Average Position of motif in Targets35.4 +/- 21.3bp
Average Position of motif in Background36.9 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ASH1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:AAGTCABT
-AGTCAA-

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--AAGTCABT
AAAAGTCAA-

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:AAGTCABT
--GTCATN

hth/MA0227.1/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AAGTCABT
CTGTCA--

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCABT-
NCTGTCANAG

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AAGTCABT-
-AGTCACGC

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AAGTCABT
NTGTCAN-

tll/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCABT
AAAGTCA--

Vis/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCABT-
NCTGTCANNT

vis/MA0252.1/Jaspar

Match Rank:10
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AAGTCABT
CTGTCA--