Information for 7-CCGCCCGC (Motif 5)


Reverse Opposite:

p-value:1e-20
log p-value:-4.814e+01
Information Content per bp:1.625
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif12.90%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets40.0 +/- 21.0bp
Average Position of motif in Background36.8 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

btd/dmmpmm(Noyes)/fly

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CCGCCCGC
ATCCGCCCCC

btd/MA0443.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCCGC-
TCCGCCCCCT

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCGCCCGC-----
TCCGCCCCCGCATT

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCCGC---
YCCGCCCACGCN

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CCGCCCGC-----
GGTCCCGCCCCCTTCTC

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CCGCCCGC---
CCCCCGCCCCCGCC

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCGCCCGC
CACCGCCCCC

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCCGC-
GCCMCGCCCMCY

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCGCCCGC----
GACCCCCCGCGAAG

SUT1?/SacCer-Promoters/Homer

Match Rank:10
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCGCCCGC
CCCCGCGC