Information for 9-CCGCGRCG (Motif 7)


Reverse Opposite:

p-value:1e-15
log p-value:-3.622e+01
Information Content per bp:1.613
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.86%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets35.7 +/- 21.3bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGRCG
GCGGCGACA

STP1(MacIsaac)/Yeast

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCGCGRCG-
-TGCGGCGC

STP1/MA0394.1/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCGCGRCG-
-TGCGGCGC

RSC3/MA0374.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCGCGRCG
-CGCGCGG

PDR1/MA0352.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CCGCGRCG
TCCGCGGA-

SUT1(MacIsaac)/Yeast

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CCGCGRCG
CCCCGCG---

SUT1/MA0399.1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CCGCGRCG
CCCCGCG---

Os05g0497200/MA1034.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCGCGRCG
CGGCGGCG

SWI6(MacIsaac)/Yeast

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCGCGRCG
-CGCGTC-

CRF2/MA0975.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCGCGRCG-
-GGCGGCGG