Information for 10-CGTCCCCC (Motif 8)


Reverse Opposite:

p-value:1e-13
log p-value:-3.208e+01
Information Content per bp:1.909
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.52%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets40.3 +/- 23.1bp
Average Position of motif in Background24.8 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CGTCCCCC----
GGTCCCGCCCCCTTCTC

MSN2/MA0341.1/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:CGTCCCCC-
----CCCCT

MIG1/MA0337.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CGTCCCCC--
---CCCCCGC

MSN4/MA0342.1/Jaspar

Match Rank:4
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CGTCCCCC-
----CCCCT

PB0097.1_Zfp281_1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGTCCCCC---
TCCCCCCCCCCCCCC

MIG2/MA0338.1/Jaspar

Match Rank:6
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CGTCCCCC---
----CCCCGCA

MIG3/MA0339.1/Jaspar

Match Rank:7
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CGTCCCCC---
----CCCCGCA

ADR1/MA0268.1/Jaspar

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGTCCCCC--
---ACCCCAC

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGTCCCCC-----
TATCGACCCCCCACAG

PB0100.1_Zfp740_1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGTCCCCC-----
CCCCCCCCCCCACTTG