Information for 1-DKCTATTTTTRG (Motif 1)


Reverse Opposite:

p-value:1e-192
log p-value:-4.426e+02
Information Content per bp:1.614
Number of Target Sequences with motif1274.0
Percentage of Target Sequences with motif42.47%
Number of Background Sequences with motif220.8
Percentage of Background Sequences with motif8.64%
Average Position of motif in Targets37.1 +/- 18.9bp
Average Position of motif in Background36.6 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:DKCTATTTTTRG-
-KCTATTTTTRGH

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:DKCTATTTTTRG---
TTCTATTTTTAGNNN

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.94
Offset:1
Orientation:forward strand
Alignment:DKCTATTTTTRG-
-GCTATTTTTGGM

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:DKCTATTTTTRG
--CTATTTTTGG

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:forward strand
Alignment:DKCTATTTTTRG-
-GCTATTTTTAGC

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.90
Offset:2
Orientation:forward strand
Alignment:DKCTATTTTTRG
--TTATTTTTAG

MEF2A/MA0052.3/Jaspar

Match Rank:7
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:DKCTATTTTTRG-
-TCTATTTTTAGA

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:DKCTATTTTTRG-
-TCTATTTATAGN

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:DKCTATTTTTRG-
-GCTATTTATAGC

br(var.2)/MA0011.1/Jaspar

Match Rank:10
Score:0.85
Offset:0
Orientation:forward strand
Alignment:DKCTATTTTTRG
TACTATTT----