Information for 21-ACACAGCAGT (Motif 11)


Reverse Opposite:

p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.839
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.4 +/- 20.9bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAGT---
CCACACAGCAGGAGA

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ACACAGCAGT---
-CACAGCAGGGGG

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAGT---
GAGCACAGCAGGACA

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAGT---
CCACACAGCAGGAGA

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ACACAGCAGT--
--ACAGCTGTTV

PL0003.1_hlh-2::cnd-1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACACAGCAGT----
TNNGACAGCTGTTNNN

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACACAGCAGT
-CACAGN---

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACACAGCAGT
ACAAAG----

MAF::NFE2/MA0501.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACACAGCAGT--
ATGACTCAGCAATTT

E-box/Drosophila-Promoters/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGCAGT-
NDAACAGCTGTT