Information for 14-CGTTTCGT (Motif 12)


Reverse Opposite:

p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.754
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets34.4 +/- 21.2bp
Average Position of motif in Background42.4 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NAC083/MA1043.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGTTTCGT--
NGTTGCGTAT

NAC025/MA0935.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGTTTCGT-
-GTTACGTA

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGTTTCGT----
TNTGGTTTCGATACN

che-1/MA0260.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGTTTCGT
GGTTTC--

MA0260.1_che-1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGTTTCGT
GGTTTC--

STE12/MA0393.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGTTTCGT
TGTTTCA-

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CGTTTCGT----
NNNTTGGTTTCGNTNNN

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTCGT-----
NTGGTTTCGGTTNNN

Deaf1/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CGTTTCGT-
---TTCGGG

Deaf1/MA0185.1/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CGTTTCGT-
---TTCGGG