Information for 16-ATTAGCAA (Motif 13)


Reverse Opposite:

p-value:1e-8
log p-value:-1.914e+01
Information Content per bp:1.892
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets34.5 +/- 20.4bp
Average Position of motif in Background42.1 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ARR1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATTAGCAA
-TTAGTAA

YAP3/Literature(Harbison)/Yeast

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATTAGCAA
-TTAGTAA

YAP5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATTAGCAA
-TTAGTAA

YAP6/Literature(Harbison)/Yeast

Match Rank:4
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATTAGCAA
-TTAGTAA

YAP3(MacIsaac)/Yeast

Match Rank:5
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATTAGCAA
-TTAGTAA

br-Z4/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATTAGCAA
ATTAGT--

YAP7(MacIsaac)/Yeast

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATTAGCAA--
ATTAGTAAGC

RFX1/MA0365.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ATTAGCAA--
--TAGCAACC

GTS1(MacIsaac)/Yeast

Match Rank:9
Score:0.72
Offset:2
Orientation:forward strand
Alignment:ATTAGCAA
--TACCAA

CAD1(MacIsaac)/Yeast

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATTAGCAA--
ATTAGTAAGC