Information for 18-AAATTTAG (Motif 14)


Reverse Opposite:

p-value:1e-6
log p-value:-1.410e+01
Information Content per bp:1.914
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif28.4
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets41.0 +/- 19.9bp
Average Position of motif in Background40.2 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SUM1/MA0398.1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AAATTTAG
AAAAATTTT-

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----AAATTTAG---
NNNNTGAATTCANNNC

tll/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAATTTAG
AAATTAA-

RLM1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAATTTAG
CTAAAAATAG

SPT23/MA0388.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAATTTAG
GAAATCAA-

cad/dmmpmm(Down)/fly

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAATTTAG
AAAAATTT--

sd/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAATTTAG
ANAAATNCA-

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAATTTAG
CCATATATGG

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAATTTAG
GAAATCAA-

SPT23(MacIsaac)/Yeast

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAATTTAG
GAAATCAA-