Information for 14-GGGGAGGAAG (Motif 7)


Reverse Opposite:

p-value:1e-15
log p-value:-3.571e+01
Information Content per bp:1.653
Number of Target Sequences with motif233.0
Percentage of Target Sequences with motif7.77%
Number of Background Sequences with motif74.8
Percentage of Background Sequences with motif2.92%
Average Position of motif in Targets39.1 +/- 21.3bp
Average Position of motif in Background33.3 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGGGAGGAAG--
--AGAGGAAGTG

GCR2/MA0305.1/Jaspar

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GGGGAGGAAG-
----NGGAAGC

Eip74EF/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GGGGAGGAAG---
----AGGAAGTAT

GCR2(MacIsaac)/Yeast

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GGGGAGGAAG-
----NGGAAGC

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGGAAG
TGGGGA-----

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGGGAGGAAG-
-GGGAGGACNG

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGGGAGGAAG---
-NDCAGGAARTNN

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGAGGAAG--
NNTNNGGGGCGGNGNGN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGAGGAAG-
NNTNAGGGGCGGNNNN

GCR1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGGAGGAAG--
---GAGGAAGCC