Information for 15-TCACAGTGAC (Motif 8)


Reverse Opposite:

p-value:1e-15
log p-value:-3.546e+01
Information Content per bp:1.655
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets37.2 +/- 20.1bp
Average Position of motif in Background46.3 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TCACAGTGAC---
GGTCANNGTGACCTN

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGTGAC--
NNNNTGCCAGTGATTG

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TCACAGTGAC---
AAGGTCACGGTGACCTG

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCACAGTGAC-
---NCGTGACN

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCACAGTGAC--
AGGNCANNGTGACCT

RTG3/Literature(Harbison)/Yeast

Match Rank:6
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TCACAGTGAC-
-----GTGACC

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCACAGTGAC
-CACAGN---

eyg/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGTGAC-----
NCNNACTCAGTGANTACTC

MET28/MA0332.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCACAGTGAC
CCACAG----

MET28(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCACAGTGAC
CCACAG----