Information for 13-CCGRCGCC (Motif 9)


Reverse Opposite:

p-value:1e-13
log p-value:-3.172e+01
Information Content per bp:1.813
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif3.93%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets35.8 +/- 17.9bp
Average Position of motif in Background35.3 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF4/MA0992.1/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CCGRCGCC
CCGCCGCC

Os05g0497200/MA1034.1/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CCGRCGCC-
-CGCCGCCA

CRF2/MA0975.1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CCGRCGCC
CCGCCGCC

RAP2-6/MA1052.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CCGRCGCC
GCGCCGCC

NtERF2(AP2/EREBP)/Nicotiana tabacum/AthaMap

Match Rank:5
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CCGRCGCC
-CGCCGCC

ERF109/MA1053.1/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CCGRCGCC
GCGCCGCC

RAP2-3/MA1051.1/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CCGRCGCC
GCGCCGCC

CRF4/MA0976.1/Jaspar

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CCGRCGCC
GCGCCGCC

brk/dmmpmm(Down)/fly

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CCGRCGCC
CCGGCGCT

ERF3/MA1005.1/Jaspar

Match Rank:10
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CCGRCGCC-
-CGCCGCCA