Information for 12-ACGCGTCG (Motif 10)


Reverse Opposite:

p-value:1e-12
log p-value:-2.893e+01
Information Content per bp:1.623
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets37.6 +/- 19.9bp
Average Position of motif in Background44.3 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:ACGCGTCG
ACGCGTC-

MBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:ACGCGTCG
ACGCGTC-

SWI6(MacIsaac)/Yeast

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:ACGCGTCG
-CGCGTC-

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:ACGCGTCG
ACGCGTT-

MBP1/MA0329.1/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:forward strand
Alignment:ACGCGTCG
ACGCGTA-

CMTA3/MA0970.1/Jaspar

Match Rank:6
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ACGCGTCG
NNNACGCGG--

RSC3/MA0374.1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:ACGCGTCG
-CGCGCGG

CMTA2/MA0969.1/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ACGCGTCG-
ACGCGGNNN

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ACGCGTCG-
HHCACGCGCBTN

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACGCGTCG
CACGCA---