Information for 14-CTTTAAAGAG (Motif 11)


Reverse Opposite:

p-value:1e-11
log p-value:-2.760e+01
Information Content per bp:1.710
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif4.03%
Number of Background Sequences with motif22.1
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets36.9 +/- 19.0bp
Average Position of motif in Background40.7 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAAAGAG
NNGCTTTANNN--

PBF/MA0064.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAAAGAG
GCTTT------

MNB1A/MA0053.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAAAGAG
GCTTT------

Dof3/MA0021.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAAAGAG
CGCTTT------

pan/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTTTAAAGAG
CTTTGAT---

Dof2/MA0020.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAAAGAG
NGCTTT------

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAAAGAG
NATTCAAAT--

RLM1(MacIsaac)/Yeast

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTTAAAGAG
TCTATAAATA-

PHYPADRAFT_140773/MA0987.1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAAAGAG
NNNCTTTNNN---

DOF1.8/MA0981.1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAAAGAG
NNNCTTTTNN---