Information for 13-CGCGTCAC (Motif 13)


Reverse Opposite:

p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.714
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif4.20%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets39.5 +/- 20.4bp
Average Position of motif in Background36.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI6(MacIsaac)/Yeast

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CGCGTCAC
CGCGTC--

MBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCAC
ACGCGTC--

CBF1(MacIsaac)/Yeast

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGCGTCAC
CACGTGAC

RTG3(MacIsaac)/Yeast

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGCGTCAC
TGAGTCAT

usp/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGCGTCAC-
GGGGTCACG

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CGCGTCAC---
CGCGCCGGGTCACGTA

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTCAC
ACGCGTC--

ARG80/MA0271.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGCGTCAC
-GCGTCT-

CMTA3/MA0970.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCAC
CCGCGTTAC

RTG3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CGCGTCAC
--GGTCAC