Information for 17-CCGGTCCCCG (Motif 14)


Reverse Opposite:

p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.957
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets35.0 +/- 19.3bp
Average Position of motif in Background31.4 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

LEU3(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CCGGTCCCCG
CCGGTACCGG

LEU3/LEU3_SM/47-LEU3(Harbison)/Yeast

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CCGGTCCCCG
CCGGTACCGG

NHP10/MA0344.1/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:CCGGTCCCCG--
----TCCCCGGC

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:CCGGTCCCCG
----TCCCCA

MIG3/MA0339.1/Jaspar

Match Rank:5
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CCGGTCCCCG--
-----CCCCGCA

MIG2/MA0338.1/Jaspar

Match Rank:6
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CCGGTCCCCG--
-----CCCCGCA

TCP16/MA0587.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCGGTCCCCG
CCGGGTCCAC-

MIG1/MA0337.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CCGGTCCCCG-
----CCCCCGC

ZMS1/MA0441.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CCGGTCCCCG--
---TTCCCCGCA

ARALYDRAFT_897773/MA1054.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGGTCCCCG
GTGGTCCCCA