Information for 6-CCTTAACTGMTG (Motif 15)


Reverse Opposite:

p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.477
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets39.4 +/- 17.5bp
Average Position of motif in Background47.5 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTTAACTGMTG--
ANNCATTAATTGCTNGN

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTTAACTGMTG--
ANNCATTAATTGCTNGN

Hmx3/MA0898.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTTAACTGMTG--
ATTNNTTAATTGCTTGT

PH0043.1_Hmx3/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTTAACTGMTG--
ATTNNTTAATTGCTTGT

Hmx2/MA0897.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTTAACTGMTG--
ATTCNTTAATTGCTTGT

PH0042.1_Hmx2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTTAACTGMTG--
ATTCNTTAATTGCTTGT

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTTAACTGMTG---
NNNTTAATTGGTTTTT

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTTAACTGMTG-
-TTTGATTGATGN

CG34031/MA0444.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTTAACTGMTG
--TTAATTG---

NTL9/MA1046.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTTAACTGMTG
--TTAAGTAAT-