Information for 22-ASKCAGCCAG (Motif 18)


Reverse Opposite:

p-value:1e-7
log p-value:-1.759e+01
Information Content per bp:1.565
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets43.3 +/- 19.2bp
Average Position of motif in Background38.1 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:ASKCAGCCAG
---CAGCCAC

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ASKCAGCCAG
---CAGCC--

SWI5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ASKCAGCCAG
--CCAGCA--

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ASKCAGCCAG
--TGAGTCA-

ASH1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:ASKCAGCCAG
----AGTCAA

GCN4(MacIsaac)/Yeast

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ASKCAGCCAG
--TGAGTCAT

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ASKCAGCCAG
--BCAGACWA

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ASKCAGCCAG-
GGTGACTCATG

BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ASKCAGCCAG
---GAGTCA-

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ASKCAGCCAG-------
--SCAGYCADGCATGAC