Information for 16-CCGCTCGT (Motif 19)


Reverse Opposite:

p-value:1e-6
log p-value:-1.568e+01
Information Content per bp:1.527
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif3.43%
Number of Background Sequences with motif29.0
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets35.9 +/- 19.0bp
Average Position of motif in Background32.4 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCGCTCGT
-TGCTGGT

SWI5/MA0402.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCGCTCGT-
-TGCTGGTT

ACE2/MA0267.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCGCTCGT
-TGCTGGT

SWI5(MacIsaac)/Yeast

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCGCTCGT-
-TGCTGGTT

PHD1/PHD1_BUT90/8-SUT1(Harbison)/Yeast

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCGCTCGT
GCCGCAGG-

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGCTCGT
-NGCTN--

MSN4/MA0342.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGCTCGT
CCCCT---

RGM1/MA0366.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCGCTCGT
CCCCT---

CHA4/MA0283.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTCGT
TCTCCGCC---

MSN2/MA0341.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCGCTCGT
CCCCT---