Information for 17-GGCCATCT (Motif 21)


Reverse Opposite:

p-value:1e-4
log p-value:-1.072e+01
Information Content per bp:1.934
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets40.4 +/- 16.6bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GGCCATCT---
-GCCATCTGTT

SKN7/MA0381.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GGCCATCT
GGCCAT--

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATCT--
GCNGCCATCTTG

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGCCATCT------
CCNNACCATCTGGCCTN

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATCT--
GCCGCCATCTTG

Tal1

Match Rank:6
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGCCATCT-
---CATCTG

CTCF/MA0531.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATCT-----
GGCGCCATCTAGCGG

pho/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGCCATCT
-GCCATT-

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCCATCT---
-RCCATMTGTT

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCCATCT-----
-GCCAGCTGBTNB