Information for 8-CGCSCTCCGG (Motif 6)


Reverse Opposite:

p-value:1e-19
log p-value:-4.437e+01
Information Content per bp:1.495
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets37.3 +/- 18.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:CGCSCTCCGG
---GCTCCG-

ADR1/Literature(Harbison)/Yeast

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGCSCTCCGG
---ACCCCN-

ADR1(MacIsaac)/Yeast

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGCSCTCCGG
---ACCCCN-

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGCSCTCCGG
CTCTCTCY--

SIP4/MA0380.1/Jaspar

Match Rank:5
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CGCSCTCCGG-
----CTCCGGA

CHA4/MA0283.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CGCSCTCCGG-
---TCTCCGCC

CAT8/MA0280.1/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGCSCTCCGG
----NTCCGG

MIG3/MA0339.1/Jaspar

Match Rank:8
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGCSCTCCGG-
----CCCCGCA

NHP10/MA0344.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGCSCTCCGG-
---TCCCCGGC

SUT1/SUT1_YPD/[](Harbison)/Yeast

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCSCTCCGG
CCGGCCCCGC