Information for 9-TTCAAATGCA (Motif 7)


Reverse Opposite:

p-value:1e-18
log p-value:-4.233e+01
Information Content per bp:1.656
Number of Target Sequences with motif122.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets32.0 +/- 22.5bp
Average Position of motif in Background43.9 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

INO4(MacIsaac)/Yeast

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TTCAAATGCA
TTCACATGC-

INO2(MacIsaac)/Yeast

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TTCAAATGCA
TTCACATGC-

INO4/MA0322.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTCAAATGCA
TTCACATGC-

INO2/MA0321.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TTCAAATGCA
TTCACATGC-

CST6(MacIsaac)/Yeast

Match Rank:5
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TTCAAATGCA
--NAAATGCA

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAATGCA
NATTCAAAT---

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TTCAAATGCA
CGGTTTCAAA----

INO4/INO4_YPD/4-INO4,37-INO2(Harbison)/Yeast

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTCAAATGCA
TTTTCACATG--

RME1(MacIsaac)/Yeast

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTCAAATGCA
TCCAAAGGAA

RME1/MA0370.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTCAAATGCA
TCCAAAGGAA