Information for 9-CCATCGCC (Motif 8)


Reverse Opposite:

p-value:1e-18
log p-value:-4.176e+01
Information Content per bp:1.615
Number of Target Sequences with motif260.0
Percentage of Target Sequences with motif8.67%
Number of Background Sequences with motif66.5
Percentage of Background Sequences with motif2.96%
Average Position of motif in Targets33.3 +/- 19.1bp
Average Position of motif in Background39.7 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCATCGCC---
-CACCGCCCCC

Os05g0497200/MA1034.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCATCGCC-
-CGCCGCCA

Run/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCATCGCC
-CACCGCC

brk/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCATCGCC-
--AGCGCCA

ERF008/MA0979.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCATCGCC-
-CGCCGCCC

RAP2-6/MA1052.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCATCGCC
GCGCCGCC

brk/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCATCGCC--
--GGCGCCAG

brk/MA0213.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCATCGCC--
--GGCGCCAG

brk/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCATCGCC-
--GGCGCCA

CRF2/MA0975.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCATCGCC
CCGCCGCC