Information for 13-CCCGTGGAGA (Motif 9)


Reverse Opposite:

p-value:1e-14
log p-value:-3.238e+01
Information Content per bp:1.609
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets37.3 +/- 19.7bp
Average Position of motif in Background28.3 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCCGTGGAGA-
TCCCCTGGGGAC

MET28/MA0332.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCGTGGAGA
-CTGTGG---

MET28(MacIsaac)/Yeast

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCGTGGAGA
-CTGTGG---

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCCGTGGAGA
---GTGGAT-

ADR1/MA0268.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCCGTGGAGA
---GTGGGGT

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCCGTGGAGA-
ATTGCCTGAGGCGAA

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCCGTGGAGA-
ATTCCCTGAGGGGAA

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCCGTGGAGA
----TGGGGA

YDR520C(MacIsaac)/Yeast

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCGTGGAGA
TCCGCCGGAGA

MIG3/MA0339.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCCGTGGAGA
--TGCGGGG-