Information for 1-GGCGGGCG (Motif 1)


Reverse Opposite:

p-value:1e-62
log p-value:-1.439e+02
Information Content per bp:1.652
Number of Target Sequences with motif319.0
Percentage of Target Sequences with motif28.36%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets37.0 +/- 20.7bp
Average Position of motif in Background37.5 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.53
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGCGGGCG
GGCGCGCT

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----GGCGGGCG--
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----GGCGGGCG--
ATAAGGGCGCGCGAT

UGA3/MA0410.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGCG
CGGCGGGA-

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGCG---
NAGANTGGCGGGGNGNA

RDS1/MA0361.1/Jaspar

Match Rank:6
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GGCGGGCG-
--CGGCCGA

RSC30/MA0375.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGCGGGCG
CGCGCGCG

TEA1/MA0405.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGCGGGCG-
-GCGGACAT

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGCG--
GGGCGGGAAGG

YLL054C/MA0429.1/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGCGGGCG-
--CGGCCGA