Information for 13-GNAAAYGA (Motif 11)


Reverse Opposite:

p-value:1e-26
log p-value:-6.010e+01
Information Content per bp:1.596
Number of Target Sequences with motif426.0
Percentage of Target Sequences with motif37.87%
Number of Background Sequences with motif114.7
Percentage of Background Sequences with motif15.56%
Average Position of motif in Targets36.7 +/- 20.5bp
Average Position of motif in Background39.7 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FKH1/FKH1_YPD/53-FKH1,53-FKH2(Harbison)/Yeast

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GNAAAYGA
GTAAACAA

NCU00019/MA0929.1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GNAAAYGA-
ATTGTAAACAAA

FOXD2/MA0847.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GNAAAYGA
GTAAACA-

PB0012.1_Elf3_1/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GNAAAYGA
AACAAGGAAGTAA

pha-4/MA0546.1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GNAAAYGA
AAAGTAAACA-

FKH1(MacIsaac)/Yeast

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GNAAAYGA
AAANGTAAACAA

FOXO3/MA0157.2/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GNAAAYGA
GTAAACAA

FOXI1/MA0042.2/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GNAAAYGA
GTAAACA-

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GNAAAYGA
GTAAACA-

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GNAAAYGA
NACAGGAAAT--