Information for 19-CGGCGACC (Motif 12)


Reverse Opposite:

p-value:1e-20
log p-value:-4.687e+01
Information Content per bp:1.790
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif8.62%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets30.8 +/- 18.7bp
Average Position of motif in Background60.1 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGACC
GCGGCGACA

ERF8/MA0994.1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGACC
NNTGGCGGCG---

ERF112/MA1002.1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGACC
TGGCGGCGGN-

ERF069/MA0997.1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGACC
NGGCGGCGN--

RTG3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CGGCGACC
--GTGACC

ERF7/MA0993.1/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGACC
NNTGGCGGCG---

ERF008/MA0979.1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGACC
GGGCGGCG---

ERF11/MA1001.1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGACC
NTGNCGGCGN--

ERF094/MA1049.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGGCGACC
CGGCGGCG

ERF3/MA1005.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGACC
TGGCGGCG---