Information for 20-TCTCGCGG (Motif 13)


Reverse Opposite:

p-value:1e-18
log p-value:-4.332e+01
Information Content per bp:1.629
Number of Target Sequences with motif141.0
Percentage of Target Sequences with motif12.53%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif1.79%
Average Position of motif in Targets39.6 +/- 20.1bp
Average Position of motif in Background54.9 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33/MA0527.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TCTCGCGG------
CTCTCGCGAGATCTG

UGA3/MA0410.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TCTCGCGG
TCCCGCCG

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TCTCGCGG----
TCTCGCGAGAAT

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TCTCGCGG-----
GTTCTCGCGAGANCC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TCTCGCGG
NYTTCCCGCC-

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TCTCGCGG
NNTTCCCGCCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TCTCGCGG
DTTTCCCGCC-

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TCTCGCGG
VDTTTCCCGCCA

PHD1/PHD1_BUT90/8-SUT1(Harbison)/Yeast

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TCTCGCGG-
-CCTGCGGC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TCTCGCGG-
TTCCCGCCWG