Information for 14-AGAGGGAGCC (Motif 14)


Reverse Opposite:

p-value:1e-13
log p-value:-3.051e+01
Information Content per bp:1.705
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif8.18%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets35.1 +/- 17.2bp
Average Position of motif in Background32.2 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGAGGGAGCC
-GAGGAAGCC

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGAGGGAGCC
---CGGAGC-

AFT2/AFT2_H2O2Lo/10-RCS1[~AFT2](Harbison)/Yeast

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AGAGGGAGCC
---GGGTGC-

AFT2(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGAGGGAGCC
---GGGTGCA

Adf1/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGGAGCC
NACAGAAGCAGC-

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGAGGGAGCC
RGAGAGAG--

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGAGCC-----
TTGGGGGCGCCCCTAG

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGAGCC
GGGCGGGAAGG

CTCF/MA0531.1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGAGGGAGCC
CCGCTAGATGGCGCC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGAGCC
TGCGTGGGYG--