Information for 25-TTACCGCT (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.634e+01
Information Content per bp:1.530
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif4.09%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets37.4 +/- 23.1bp
Average Position of motif in Background46.5 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTACCGCT
NYTTCCCGCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTACCGCT
DTTTCCCGCC

prd/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTACCGCT
ATTATCAC-

prd/dmmpmm(SeSiMCMC)/fly

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTACCGCT
GATTATCAC-

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTACCGCT--
TTCCCGCCWG

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTACCGCT-
NNTTCCCGCCC

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTACCGCT----
NNNNTTGACCCCTNNNN

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTACCGCT-
VDTTTCCCGCCA

RDR1/MA0360.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTACCGCT
GTTCCGCA

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTACCGCT-
NCTTCCCGCCC