Information for 3-AGCCSCGK (Motif 5)


Reverse Opposite:

p-value:1e-39
log p-value:-9.115e+01
Information Content per bp:1.730
Number of Target Sequences with motif190.0
Percentage of Target Sequences with motif16.89%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets35.9 +/- 20.5bp
Average Position of motif in Background45.1 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1/MA0285.1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---AGCCSCGK
CTAAGCCAC--

STP1(MacIsaac)/Yeast

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGCCSCGK
GCGCCGCA-

STP1/MA0394.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGCCSCGK
GCGCCGCA-

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGCCSCGK
CAGCC----

abi4/MA0123.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGCCSCGK
GGGGGCACCG-

CRZ1(MacIsaac)/Yeast

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGCCSCGK
CAGCCAC--

PDR1/MA0352.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCCSCGK-
-TCCGCGGA

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCCSCGK--
-GCGGCGACA

Mad/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCCSCGK---
-GCGNCGCCNG

NHP10/MA0344.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCCSCGK-
-TCCCCGGC