Information for 6-TCCGCGCT (Motif 7)


Reverse Opposite:

p-value:1e-33
log p-value:-7.780e+01
Information Content per bp:1.790
Number of Target Sequences with motif252.0
Percentage of Target Sequences with motif22.40%
Number of Background Sequences with motif25.4
Percentage of Background Sequences with motif3.45%
Average Position of motif in Targets39.0 +/- 20.8bp
Average Position of motif in Background39.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZMS1/MA0441.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TCCGCGCT
TTCCCCGCA

RSC3/MA0374.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TCCGCGCT-
--CGCGCGG

SUT1?/SacCer-Promoters/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TCCGCGCT
CCCCGCGC-

SUT1/MA0399.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TCCGCGCT
-CCCCGCG

SUT1(MacIsaac)/Yeast

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TCCGCGCT
-CCCCGCG

RSC30/MA0375.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCCGCGCT
CGCGCGCG

TDA9/MA0431.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCCGCGCT-
ACCCCGCAC

MIG2/MA0338.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCCGCGCT
-CCCCGCA

PDR1/MA0352.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCCGCGCT
TCCGCGGA

MIG3/MA0339.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCCGCGCT
-CCCCGCA