Information for 7-CCTGGGGG (Motif 8)


Reverse Opposite:

p-value:1e-33
log p-value:-7.762e+01
Information Content per bp:1.785
Number of Target Sequences with motif261.0
Percentage of Target Sequences with motif23.20%
Number of Background Sequences with motif28.1
Percentage of Background Sequences with motif3.81%
Average Position of motif in Targets36.7 +/- 18.2bp
Average Position of motif in Background42.7 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MIG1/MA0337.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CCTGGGGG
-GCGGGGN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CCTGGGGG
GTCCCCAGGGGA

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CCTGGGGG---
ATTGCCTGAGGCGAA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CCTGGGGG---
SCCTSAGGSCAW

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CCTGGGGG---
ATTCCCTGAGGGGAA

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGGGG--
ACCCCCCCGGGGGGN

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CCTGGGGG-----
ANTNCCGGGGGGAANTT

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCTGGGGG
ATGCCCTGAGGC

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGGGG--
TGCCCNGGGGCA

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGGGG--
NCCCCCCCGGGGGGN