Information for 21-CTTAAAGCTG (Motif 13)


Reverse Opposite:

p-value:1e-14
log p-value:-3.308e+01
Information Content per bp:1.658
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets38.5 +/- 17.7bp
Average Position of motif in Background30.7 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTAAAGCTG
AAATAAAGCAA

Dof2/MA0020.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTTAAAGCTG
---AAAGCA-

MNB1A/MA0053.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTTAAAGCTG
---AAAGC--

PBF/MA0064.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTTAAAGCTG
---AAAGC--

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTTAAAGCTG---
---HCAGCTGDTN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTTAAAGCTG---
---ACAGCTGTTV

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTTAAAGCTG-
----AAGCTTG

PHYPADRAFT_140773/MA0987.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTAAAGCTG
CAAAAAGTAA

DOF1.8/MA0981.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTAAAGCTG
CAAAAAGTTA

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTTAAAGCTG-
-NAACAGCTGG