Information for 4-GYTAATKV (Motif 3)


Reverse Opposite:

p-value:1e-46
log p-value:-1.071e+02
Information Content per bp:1.549
Number of Target Sequences with motif1193.0
Percentage of Target Sequences with motif39.77%
Number of Background Sequences with motif452.3
Percentage of Background Sequences with motif21.05%
Average Position of motif in Targets37.3 +/- 19.8bp
Average Position of motif in Background37.2 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2/MA0900.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GYTAATKV--
GNTAATTANN

en/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GYTAATKV-
NGTTAATTAN

HOXB3/MA0903.1/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GYTAATKV--
NNTAATTANN

HOXB2/MA0902.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GYTAATKV--
NNTAATTANN

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GYTAATKV
GKTAATGR

ftz/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GYTAATKV
TGTTAATGA

EN2/MA0642.1/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GYTAATKV--
GNTAATTGGN

Lbl/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GYTAATKV-
NGCTAATTAG

GSX2/MA0893.1/Jaspar

Match Rank:9
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GYTAATKV--
NTTAATTAGN

eve/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GYTAATKV-
TGCTAATGAN