Information for 8-AGCGCCGC (Motif 7)


Reverse Opposite:

p-value:1e-34
log p-value:-8.054e+01
Information Content per bp:1.603
Number of Target Sequences with motif407.0
Percentage of Target Sequences with motif13.57%
Number of Background Sequences with motif81.6
Percentage of Background Sequences with motif3.80%
Average Position of motif in Targets36.3 +/- 20.3bp
Average Position of motif in Background42.3 +/- 47.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF109/MA1053.1/Jaspar

Match Rank:1
Score:0.90
Offset:1
Orientation:forward strand
Alignment:AGCGCCGC-
-GCGCCGCC

RAP2-10/MA0980.1/Jaspar

Match Rank:2
Score:0.90
Offset:1
Orientation:forward strand
Alignment:AGCGCCGC-
-GCGCCGCC

RAP2-3/MA1051.1/Jaspar

Match Rank:3
Score:0.89
Offset:1
Orientation:forward strand
Alignment:AGCGCCGC-
-GCGCCGCC

RAP2-6/MA1052.1/Jaspar

Match Rank:4
Score:0.89
Offset:1
Orientation:forward strand
Alignment:AGCGCCGC-
-GCGCCGCC

CRF4/MA0976.1/Jaspar

Match Rank:5
Score:0.88
Offset:1
Orientation:forward strand
Alignment:AGCGCCGC-
-GCGCCGCC

STP1(MacIsaac)/Yeast

Match Rank:6
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:AGCGCCGC-
-GCGCCGCA

STP1/MA0394.1/Jaspar

Match Rank:7
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:AGCGCCGC-
-GCGCCGCA

CRF2/MA0975.1/Jaspar

Match Rank:8
Score:0.86
Offset:1
Orientation:forward strand
Alignment:AGCGCCGC-
-CCGCCGCC

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:AGCGCCGC
GGCGCCAG

brk/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:AGCGCCGC
GGCGCCAG