Information for 8-GGGGAAATAG (Motif 10)


Reverse Opposite:

p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.848
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.8 +/- 18.7bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br(var.2)/MA0011.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GGGGAAATAG--
----AAATAGTA

YPR196W/MA0437.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAAATAG
CGGAGAAAT--

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAATAG
TGGGGA-----

br-Z2/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GGGGAAATAG----
----AAATAGAAAA

NDD1(MacIsaac)/Yeast

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGGGAAATAG
AAAGGGGAAA---

kni/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGGAAATAG
GGGAACAAA-

bin/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGGGAAATAG
--ATAAATA-

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGGGAAATAG
TTAAGAGGAAGTTA

br-Z4/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGGGAAATAG
--AGAAACA-

PB0124.1_Gabpa_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGAAATAG-
NNNNGGGGGAAGANGG